STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000524475_04248Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000524475_04249
Unannotated protein.
       0.578
GCA_000524475_04250
Unannotated protein.
       0.578
GCA_000524475_03023
Unannotated protein.
  
     0.575
GCA_000524475_04251
Unannotated protein.
       0.546
GCA_000524475_04252
Unannotated protein.
       0.516
GCA_000524475_03022
Unannotated protein.
  
     0.429
GCA_000524475_01285
Unannotated protein.
   
    0.424
GCA_000524475_01583
Unannotated protein.
   
    0.424
GCA_000524475_02561
Unannotated protein.
  
     0.423
GCA_000524475_00646
Unannotated protein.
  
     0.407
Your Current Organism:
Tomitella biformata
NCBI taxonomy Id: 1448389
Other names: T. biformata AHU 1821, Tomitella biformata AHU 1821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.