STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000712135_01421Unannotated protein. (422 aa)    
Predicted Functional Partners:
GCA_000712135_01420
Unannotated protein.
 
     0.955
GCA_000712135_01419
Unannotated protein.
 
     0.904
GCA_000712135_01422
Unannotated protein.
       0.783
GCA_000712135_03171
Unannotated protein.
  
 0.746
GCA_000712135_04000
Unannotated protein.
  
 0.746
GCA_000712135_01535
Unannotated protein.
  
 0.745
GCA_000712135_03763
Unannotated protein.
  
 0.745
GCA_000712135_02548
Unannotated protein.
    
  0.702
GCA_000712135_02563
Unannotated protein.
    
  0.702
GCA_000712135_02328
Unannotated protein.
   
 
  0.696
Your Current Organism:
Sphingomonas sp. UNC305MFCol52
NCBI taxonomy Id: 1449076
Other names: S. sp. UNC305MFCol5.2, Sphingomonas sp. UNC305MFCol5.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.