STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744885_01413Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000744885_01412
Unannotated protein.
 
 0.973
GCA_000744885_00778
Unannotated protein.
 0.957
GCA_000744885_01698
Unannotated protein.
 
   
 
0.957
GCA_000744885_00779
Unannotated protein.
 
 0.946
GCA_000744885_01411
Unannotated protein.
    
 0.935
GCA_000744885_00780
Unannotated protein.
 
 
 0.923
GCA_000744885_01044
Unannotated protein.
  
 
 
0.837
GCA_000744885_01377
Unannotated protein.
 
 
  0.807
GCA_000744885_01348
Unannotated protein.
  
 
 
0.764
GCA_000744885_01285
Unannotated protein.
 
 
 
0.760
Your Current Organism:
Thermus amyloliquefaciens
NCBI taxonomy Id: 1449080
Other names: DSM 25898, KCTC 32024, T. amyloliquefaciens, Thermus amyloliquefaciens Yu et al. 2015, Thermus sp. YIM 77409, YIM 77409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.