STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK48940.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)    
Predicted Functional Partners:
AHK50519.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.699
AHK48941.1
L,D-transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.581
AHK50516.1
Protein liaG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
AHK48939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
AHK51244.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.510
AHK50836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.497
AHK50609.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
AHK50907.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
AHK50881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
AHK48635.1
Spore gernimation protein GerPE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
Your Current Organism:
Bacillus velezensis TrigoCor1448
NCBI taxonomy Id: 1449088
Other names: B. velezensis TrigoCor1448, Bacillus amyloliquefaciens subsp. plantarum TrigoCor1448, Bacillus methylotrophicus TrigoCor1448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.