STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744825_00455Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000744825_00456
Unannotated protein.
    0.990
GCA_000744825_01028
Unannotated protein.
    0.972
GCA_000744825_00457
Unannotated protein.
 
    0.941
GCA_000744825_01027
Unannotated protein.
 
    0.832
GCA_000744825_02045
Unannotated protein.
   
 
  0.757
GCA_000744825_01935
Unannotated protein.
    
  0.428
GCA_000744825_00458
Unannotated protein.
       0.426
Your Current Organism:
Carnobacterium mobile
NCBI taxonomy Id: 1449342
Other names: C. mobile DSM 4848, Carnobacterium mobile DSM 4848, Carnobacterium mobile MT37L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.