STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744225_07032Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_000744225_05108
Unannotated protein.
 
   0.953
GCA_000744225_05089
Unannotated protein.
 
 
 
 0.951
GCA_000744225_07494
Unannotated protein.
 
   0.943
GCA_000744225_05121
Unannotated protein.
 
   0.942
GCA_000744225_05118
Unannotated protein.
 
 
   0.941
GCA_000744225_05100
Unannotated protein.
 
 
   0.937
GCA_000744225_07479
Unannotated protein.
  
 
 0.937
GCA_000744225_05099
Unannotated protein.
 
 
   0.936
GCA_000744225_05055
Unannotated protein.
   
 
 0.927
GCA_000744225_07492
Unannotated protein.
 
 
 
 0.920
Your Current Organism:
Kitasatospora mediocidica
NCBI taxonomy Id: 1449347
Other names: K. mediocidica KCTC 9733, Kitasatospora mediocidica KCTC 9733
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.