ETX30733.1 protein (Roseivivax isoporae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Roseivivax isoporae

NCBI taxonomy Id: 1449351
Other names: R. isoporae LMG 25204, Roseivivax isoporae LMG 25204, Roseivivax isoporae sw-2, Roseivivax sp. sw-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ETX26478.1	ETX30733.1	RISW2_01765	RISW2_07970	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LDH2/MDH2 oxidoreductase family.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
ETX26944.1	ETX30052.1	RISW2_17465	RISW2_17800	Aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.	0.688
ETX26944.1	ETX30474.1	RISW2_17465	RISW2_12455	Aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
ETX26944.1	ETX30733.1	RISW2_17465	RISW2_07970	Aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.717
ETX26944.1	gcvP	RISW2_17465	RISW2_19935	Aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.713
ETX28081.1	ETX29560.1	RISW2_09925	RISW2_23775	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.963
ETX28081.1	ETX29561.1	RISW2_09925	RISW2_23780	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	0.914
ETX28081.1	ETX29562.1	RISW2_09925	RISW2_23785	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.968
ETX28081.1	ETX30474.1	RISW2_09925	RISW2_12455	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ETX28081.1	ETX30733.1	RISW2_09925	RISW2_07970	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
ETX28081.1	gcvP	RISW2_09925	RISW2_19935	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.900
ETX29560.1	ETX28081.1	RISW2_23775	RISW2_09925	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
ETX29560.1	ETX29561.1	RISW2_23775	RISW2_23780	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	0.999
ETX29560.1	ETX29562.1	RISW2_23775	RISW2_23785	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
ETX29560.1	ETX30474.1	RISW2_23775	RISW2_12455	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ETX29560.1	ETX30733.1	RISW2_23775	RISW2_07970	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
ETX29560.1	gcvP	RISW2_23775	RISW2_19935	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.856
ETX29561.1	ETX28081.1	RISW2_23780	RISW2_09925	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
ETX29561.1	ETX29560.1	RISW2_23780	RISW2_23775	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
ETX29561.1	ETX29562.1	RISW2_23780	RISW2_23785	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999