ETX29560.1 protein (Roseivivax isoporae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Knowledge-based Evidence

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Roseivivax isoporae

NCBI taxonomy Id: 1449351
Other names: R. isoporae LMG 25204, Roseivivax isoporae LMG 25204, Roseivivax isoporae sw-2, Roseivivax sp. sw-2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ETX28081.1	ETX29560.1	RISW2_09925	RISW2_23775	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.963
ETX28081.1	ETX29561.1	RISW2_09925	RISW2_23780	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	0.914
ETX28081.1	ETX29562.1	RISW2_09925	RISW2_23785	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.968
ETX28081.1	ETX29564.1	RISW2_09925	RISW2_23795	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.857
ETX28081.1	ETX29924.1	RISW2_09925	RISW2_19945	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
ETX28081.1	ETX30008.1	RISW2_09925	RISW2_20405	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
ETX28081.1	ETX30474.1	RISW2_09925	RISW2_12455	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ETX28081.1	ETX30490.1	RISW2_09925	RISW2_12545	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.956
ETX28081.1	gcvP	RISW2_09925	RISW2_19935	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.900
ETX28081.1	glyA	RISW2_09925	RISW2_02500	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	0.844
ETX29560.1	ETX28081.1	RISW2_23775	RISW2_09925	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
ETX29560.1	ETX29561.1	RISW2_23775	RISW2_23780	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the GcvT family.	0.999
ETX29560.1	ETX29562.1	RISW2_23775	RISW2_23785	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
ETX29560.1	ETX29564.1	RISW2_23775	RISW2_23795	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.972
ETX29560.1	ETX29924.1	RISW2_23775	RISW2_19945	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.871
ETX29560.1	ETX30008.1	RISW2_23775	RISW2_20405	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
ETX29560.1	ETX30474.1	RISW2_23775	RISW2_12455	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ETX29560.1	ETX30490.1	RISW2_23775	RISW2_12545	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.	0.992
ETX29560.1	gcvP	RISW2_23775	RISW2_19935	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.856
ETX29560.1	glyA	RISW2_23775	RISW2_02500	Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	0.882