STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_2348Saccharopine dehydrogenase. (357 aa)    
Predicted Functional Partners:
KALB_2347
AdpA-family transcription regulator.
 
    0.679
KALB_1396
Hypothetical protein.
  
     0.667
KALB_4744
Hypothetical protein.
  
    0.644
KALB_1986
Metallophosphoesterase.
  
     0.551
KALB_1042
LuxR family transcription regulator.
  
    0.535
KALB_8154
Hypothetical protein.
  
     0.512
KALB_4560
Hypothetical protein.
  
     0.502
KALB_3333
Hypothetical protein.
  
     0.493
KALB_2381
Hypothetical protein.
  
     0.478
KALB_6914
Hypothetical protein.
  
    0.478
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.