STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_3014Carboxymethylenebutenolidase. (228 aa)    
Predicted Functional Partners:
KALB_183
Carboxymethylenebutenolidase; Dienelactone hydrolase.
  
  
 
0.928
KALB_5077
Hypothetical protein.
  
 
 0.926
KALB_650
Putative carboxymethylenebutenolidase precursor (dienelactone hydrolase) (DLH); Dienelactone hydrolase.
  
  
 
0.926
KALB_4597
Hypothetical protein.
  
  
 
0.924
KALB_5842
Hypothetical protein.
  
  
  0.915
KALB_3646
Gluconate kinase-like protein.
 
  
 0.770
KALB_2272
Extradiol ring-cleavage dioxygenase III subunit B.
     0.667
mshC
L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.
       0.541
gcvP
Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
    0.509
KALB_2093
Hypothetical protein.
  
     0.498
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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