KALB_3268 protein (Kutzneria albida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KALB_3268

Serine/threonine protein kinase. (515 aa)

Predicted Functional Partners:

KALB_25

0.837

KALB_3302

0.837

KALB_3678

0.678

KALB_3267

0.497

KALB_5427

0.477

KALB_26

0.470

KALB_27

0.440

KALB_21

0.427

KALB_2016

0.425

KALB_3235

0.419

Your Current Organism:

Kutzneria albida

NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
KALB_2016	KALB_21	Putative serine/threonine protein kinase.	Serine/threonine-protein kinase pknB.	0.484
KALB_2016	KALB_25	Putative serine/threonine protein kinase.	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	0.969
KALB_2016	KALB_26	Putative serine/threonine protein kinase.	FHA domain-containing protein.	0.969
KALB_2016	KALB_27	Putative serine/threonine protein kinase.	FHA domain-containing protein; FOG: FHA domain.	0.966
KALB_2016	KALB_3235	Putative serine/threonine protein kinase.	Hypothetical protein.	0.862
KALB_2016	KALB_3268	Putative serine/threonine protein kinase.	Serine/threonine protein kinase.	0.425
KALB_2016	KALB_3302	Putative serine/threonine protein kinase.	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	0.969
KALB_2016	KALB_3678	Putative serine/threonine protein kinase.	Hypothetical protein.	0.993
KALB_21	KALB_2016	Serine/threonine-protein kinase pknB.	Putative serine/threonine protein kinase.	0.484
KALB_21	KALB_25	Serine/threonine-protein kinase pknB.	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	0.985
KALB_21	KALB_26	Serine/threonine-protein kinase pknB.	FHA domain-containing protein.	0.985
KALB_21	KALB_27	Serine/threonine-protein kinase pknB.	FHA domain-containing protein; FOG: FHA domain.	0.979
KALB_21	KALB_3235	Serine/threonine-protein kinase pknB.	Hypothetical protein.	0.871
KALB_21	KALB_3268	Serine/threonine-protein kinase pknB.	Serine/threonine protein kinase.	0.427
KALB_21	KALB_3302	Serine/threonine-protein kinase pknB.	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	0.969
KALB_21	KALB_3678	Serine/threonine-protein kinase pknB.	Hypothetical protein.	0.994
KALB_25	KALB_2016	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	Putative serine/threonine protein kinase.	0.969
KALB_25	KALB_21	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	Serine/threonine-protein kinase pknB.	0.985
KALB_25	KALB_26	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	FHA domain-containing protein.	0.946
KALB_25	KALB_27	PP2C-family Ser/Thr phosphatase; The only predicted protein phosphatase in M.tuberculosis, it dephosphorylates at least 5 protein kinases (pknA, pknB, pknD, pknE and pknF) and the penicillin-binding protein PBPA.	FHA domain-containing protein; FOG: FHA domain.	0.895