STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_4175Hypothetical protein. (68 aa)    
Predicted Functional Partners:
mdh
Hypothetical protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
    0.798
KALB_3655
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
   
    0.737
KALB_3638
Putative NAD(P)H nitroreductase.
 
  
 0.702
KALB_4174
Hypothetical protein.
 
  
 0.638
KALB_4162
Hypothetical protein.
 
  
 0.622
KALB_3848
Nitroreductase.
 
  
 0.545
KALB_3573
Nitroreductase.
 
  
 0.526
KALB_2542
Hypothetical protein.
  
    0.478
KALB_3900
Putative secreted protein.
 
    0.463
KALB_3579
Putative membrane protein.
 
    0.457
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.