STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acuR1LuxR-family transcription regulator. (888 aa)    
Predicted Functional Partners:
acuR2
LuxR-family transcription regulator.
 
 
0.897
acuR3
LuxR-family transcription regulator.
 
 
0.895
KALB_4616
Hypothetical protein.
  
 
 0.664
KALB_4653
Hypothetical protein.
  
 
 0.647
KALB_656
Hypothetical protein.
 
 
 0.616
KALB_8420
Hypothetical protein.
  
     0.545
KALB_6592
Hypothetical protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.527
KALB_3091
Hypothetical protein.
  
     0.522
acuS1
NDP-hexose-C3-methyltransferase.
       0.511
KALB_1890
Hypothetical protein.
  
     0.489
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.