STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapC-2Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)    
Predicted Functional Partners:
KALB_6615
Hypothetical protein.
       0.773
KALB_6614
Hypothetical protein.
       0.625
vapC-3
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
   
 0.533
KALB_6509
Hypothetical protein.
 
  
 0.477
KALB_1602
Hypothetical protein.
 
  
 0.463
KALB_1601
Hypothetical protein.
 
  
 0.448
KALB_6612
Hypothetical protein.
       0.438
KALB_6613
Hypothetical protein.
       0.438
KALB_7565
Hypothetical protein.
     
 0.429
KALB_1122
Integral membrane protein DUF6.
  
     0.414
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.