STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_7687Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (282 aa)    
Predicted Functional Partners:
KALB_1621
Short-chain dehydrogenase.
  
 
 
 0.660
KALB_7833
Hypothetical protein.
  
 
 
 0.642
KALB_2388
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.615
KALB_7822
Hypothetical protein.
  
 
 
 0.592
KALB_5646
Hypothetical protein.
  
 
 
 0.579
KALB_7686
Hypothetical protein.
       0.528
KALB_3551
Putative oxidoreductase ygfF.
  
 
 
 0.492
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.