STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_8574-hydroxyphenylpyruvate dioxygenase. (393 aa)    
Predicted Functional Partners:
KALB_120
Homogentisate 12-dioxygenase.
 
 0.996
pat
Hypothetical protein; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.915
KALB_8256
Hypothetical protein.
   
 
 0.913
KALB_1053
Putative aminotransferase.
    
 0.909
KALB_4368
Hypothetical protein.
   
 
 0.909
KALB_5564
Hypothetical protein.
   
 
 0.909
hisC
Hypothetical protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.909
KALB_122
Fumarylacetoacetase.
 
  
 0.900
KALB_6101
Hypothetical protein.
   
 0.836
KALB_1081
Amidase.
  
 
  0.812
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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