STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_8574Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)    
Predicted Functional Partners:
KALB_8573
Hypothetical protein.
       0.741
KALB_8572
Hypothetical protein.
  
    0.685
KALB_8571
Hypothetical protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.671
KALB_2157
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.660
KALB_8570
Hypothetical protein.
       0.621
KALB_8575
Hypothetical protein.
 
     0.608
KALB_2499
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.605
KALB_2636
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.590
KALB_2734
ECF subfamily RNA polymerase sigma-24 factor; DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.587
KALB_8357
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.567
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.