STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KALB_8596Hypothetical protein. (212 aa)    
Predicted Functional Partners:
KALB_8597
Hypothetical protein.
       0.812
KALB_7171
Hypothetical protein.
  
     0.676
KALB_6625
Hypothetical protein; Belongs to the glycosyl hydrolase 18 family.
  
     0.637
KALB_8840
Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.625
KALB_8595
Hypothetical protein.
    
  0.588
KALB_6416
Hypothetical protein.
  
     0.576
KALB_3450
Secreted protein.
  
     0.556
KALB_5154
Hypothetical protein.
  
     0.524
KALB_3514
Secreted protein.
  
     0.521
KALB_3688
Endonuclease/exonuclease/phosphatase.
 
   
 0.503
Your Current Organism:
Kutzneria albida
NCBI taxonomy Id: 1449976
Other names: K. albida DSM 43870, Kutzneria albida DSM 43870
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.