STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0679_01125Unannotated protein. (337 aa)    
Predicted Functional Partners:
C0679_01140
Unannotated protein.
 
  
 0.936
C0679_01145
Unannotated protein.
 
  
 0.933
C0679_01075
Unannotated protein.
 
  
 0.893
C0679_01080
Unannotated protein.
 
  
 0.891
C0679_14855
Unannotated protein.
 
  
 0.875
GCA_000647835_01830
Unannotated protein.
 
  
 0.875
C0679_12690
Unannotated protein.
 
  
 0.872
C0679_14860
Unannotated protein.
 
  
 0.866
GCA_000647835_01828
Unannotated protein.
 
  
 0.863
C0679_12695
Unannotated protein.
 
  
 0.861
Your Current Organism:
Sporolactobacillus terrae
NCBI taxonomy Id: 1449983
Other names: S. terrae HKM-1, Sporolactobacillus terrae HKM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.