STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0679_12300Unannotated protein. (218 aa)    
Predicted Functional Partners:
C0679_12305
Unannotated protein.
  
 0.969
C0679_00180
Unannotated protein.
 
     
0.889
C0679_08625
Unannotated protein.
 
    
0.834
C0679_08630
Unannotated protein.
 
    
0.566
C0679_12295
Unannotated protein.
       0.493
C0679_05995
Unannotated protein.
  
     0.473
rpsE
Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.401
Your Current Organism:
Sporolactobacillus terrae
NCBI taxonomy Id: 1449983
Other names: S. terrae HKM-1, Sporolactobacillus terrae HKM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.