STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A395HXH1RNA polymerase I-specific transcription initiation factor RRN3. (664 aa)    
Predicted Functional Partners:
A0A395HQW4
Uncharacterized protein.
   
 0.997
A0A395IB66
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
A0A395ID64
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
A0A395HUW3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.993
A0A395HV19
Uncharacterized protein.
   
 0.993
A0A395I2B4
DNA-directed RNA polymerases I and III 40 kDa polypeptide.
   
 0.992
A0A395HJS3
DNA-directed RNA polymerase I, II, and III subunit Rpb6.
   
 0.987
A0A395HZK9
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.986
A0A395HX26
Metallothionein-I gene transcription activator.
   
 0.984
A0A395HK16
DNA-directed RNA polymerases N/8 kDa subunit superfamily.
    
 0.983
Your Current Organism:
Aspergillus homomorphus
NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889
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