A0A395IBD8 protein (Aspergillus homomorphus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A395IBD8

Uncharacterized protein. (661 aa)

Predicted Functional Partners:

A0A395I1J7

0.448

A0A395I6L5

0.424

A0A395I9N2

0.423

A0A395HQR0

0.417

A0A395I8V9

0.417

A0A395HUA6

0.411

Your Current Organism:

Aspergillus homomorphus

NCBI taxonomy Id: 1450537
Other names: A. homomorphus CBS 101889, Aspergillus homomorphus CBS 101889

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A395HQR0	A0A395HUA6	KIX_2 domain-containing protein.	Uncharacterized protein.	0.412
A0A395HQR0	A0A395I9N2	KIX_2 domain-containing protein.	Uncharacterized protein.	0.458
A0A395HQR0	A0A395IBD8	KIX_2 domain-containing protein.	Uncharacterized protein.	0.417
A0A395HUA6	A0A395HQR0	Uncharacterized protein.	KIX_2 domain-containing protein.	0.412
A0A395HUA6	A0A395IBD8	Uncharacterized protein.	Uncharacterized protein.	0.411
A0A395I1J7	A0A395IBD8	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A395I6L5	A0A395I9N2	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A395I6L5	A0A395IBD8	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A395I8V9	A0A395IBD8	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A395I9N2	A0A395HQR0	Uncharacterized protein.	KIX_2 domain-containing protein.	0.458
A0A395I9N2	A0A395I6L5	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A395I9N2	A0A395IBD8	Uncharacterized protein.	Uncharacterized protein.	0.423
A0A395IBD8	A0A395HQR0	Uncharacterized protein.	KIX_2 domain-containing protein.	0.417
A0A395IBD8	A0A395HUA6	Uncharacterized protein.	Uncharacterized protein.	0.411
A0A395IBD8	A0A395I1J7	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A395IBD8	A0A395I6L5	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A395IBD8	A0A395I8V9	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A395IBD8	A0A395I9N2	Uncharacterized protein.	Uncharacterized protein.	0.423