STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celE_3Endoglucanase E precursor. (357 aa)    
Predicted Functional Partners:
pfbA
Plasmin and fibronectin-binding protein A precursor.
 
 0.837
OPJ57555.1
Xyloglucanase precursor.
 
 0.786
OPJ59563.1
The GLUG motif protein.
   
 0.704
OPJ59233.1
Immune inhibitor A peptidase M6.
   
 0.704
OPJ59111.1
Hypothetical protein.
   
 0.704
OPJ60219.1
Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family.
  
  
 0.685
OPJ58277.1
4-O-beta-D-mannosyl-D-glucose phosphorylase; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
     0.666
OPJ65081.1
Hypothetical protein; Bacterial pre-peptidase C-terminal domain.
  
 
  0.663
celZ
Endoglucanase Z precursor.
 
 0.659
OPJ64829.1
Prophage endopeptidase tail.
  
   0.653
Your Current Organism:
Clostridium oryzae
NCBI taxonomy Id: 1450648
Other names: C. oryzae, Clostridium oryzae Horino et al. 2015, Clostridium sp. KC3, DSM 28571, NBRC 110163, strain KC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.