STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293735_00013Unannotated protein. (303 aa)    
Predicted Functional Partners:
GCA_001293735_01193
Unannotated protein.
    
  0.929
GCA_001293735_00014
Unannotated protein.
 
   
 0.919
GCA_001293735_00391
Unannotated protein.
  
 
 0.890
GCA_001293735_00453
Unannotated protein.
  
 0.874
GCA_001293735_00176
Unannotated protein.
     
 0.840
GCA_001293735_00983
Unannotated protein.
    
  0.835
GCA_001293735_00561
Unannotated protein.
   
 0.822
GCA_001293735_01110
Unannotated protein.
   
 0.822
GCA_001293735_01163
Unannotated protein.
   
 0.822
GCA_001293735_01460
Unannotated protein.
  
 
 
 0.806
Your Current Organism:
Lactobacillus gorillae
NCBI taxonomy Id: 1450649
Other names: DSM 28356, JCM 19575, L. gorillae, Lactobacillus gorillae Tsuchida et al. 2014, Lactobacillus sp. GG02, Lactobacillus sp. KZ01, Lactobacillus sp. KZ02, Lactobacillus sp. KZ03, strain KZ01
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.