STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293735_00998Unannotated protein. (406 aa)    
Predicted Functional Partners:
GCA_001293735_00999
Unannotated protein.
 
 0.996
GCA_001293735_00796
Unannotated protein.
  
 0.974
GCA_001293735_00937
Unannotated protein.
 
 
 0.904
GCA_001293735_01152
Unannotated protein.
  
    0.858
GCA_001293735_01311
Unannotated protein.
    
 0.756
GCA_001293735_01576
Unannotated protein.
    
 0.728
GCA_001293735_01299
Unannotated protein.
   
 
 0.709
GCA_001293735_01300
Unannotated protein.
  
  
 0.692
GCA_001293735_01312
Unannotated protein.
    
 0.641
GCA_001293735_01000
Unannotated protein.
       0.597
Your Current Organism:
Lactobacillus gorillae
NCBI taxonomy Id: 1450649
Other names: DSM 28356, JCM 19575, L. gorillae, Lactobacillus gorillae Tsuchida et al. 2014, Lactobacillus sp. GG02, Lactobacillus sp. KZ01, Lactobacillus sp. KZ02, Lactobacillus sp. KZ03, strain KZ01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.