STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001293735_01513Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_001293735_01512
Unannotated protein.
       0.757
GCA_001293735_01514
Unannotated protein.
       0.675
GCA_001293735_00833
Unannotated protein.
  
  
 0.609
GCA_001293735_00663
Unannotated protein.
 
     0.551
GCA_001293735_01515
Unannotated protein.
       0.510
GCA_001293735_01475
Unannotated protein.
 
     0.500
GCA_001293735_00224
Unannotated protein.
  
    0.472
GCA_001293735_01499
Unannotated protein.
 
     0.454
GCA_001293735_01517
Unannotated protein.
       0.451
GCA_001293735_01516
Unannotated protein.
       0.443
Your Current Organism:
Lactobacillus gorillae
NCBI taxonomy Id: 1450649
Other names: DSM 28356, JCM 19575, L. gorillae, Lactobacillus gorillae Tsuchida et al. 2014, Lactobacillus sp. GG02, Lactobacillus sp. KZ01, Lactobacillus sp. KZ02, Lactobacillus sp. KZ03, strain KZ01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.