STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlpSmall acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family. (79 aa)    
Predicted Functional Partners:
sspN
Spore protein N; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspN family.
  
    0.922
AJF87720.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.728
AJF85104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.601
sspO
Small, acid-soluble spore protein O; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspO family.
  
    0.559
sspP
SASP P; found in forespore compartment; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family.
  
    0.552
AJF84443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0736 family.
  
     0.549
bofA
sigma-K factor-processing regulatory protein BofA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.537
AJF85739.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.519
tgl
Transglutaminase; Probably plays a role in the assembly of the spore coat proteins by catalyzing epsilon-(gamma-glutamyl)lysine cross-links. Belongs to the bacillus TGase family.
  
     0.518
AJF85085.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
Your Current Organism:
Bacillus atrophaeus
NCBI taxonomy Id: 1452
Other names: ATCC 49337, B. atrophaeus, Bacillus atriphaeus, Bacillus sp. S2 BC-2, Bacillus subtilis DSM 2277, Bacillus subtilis DSM 675, CCUG 28524, CIP 107159, DSM 7264, IFO 15539, JCM 9070, LMG 16797, LMG:16797, NBRC 15539, NRRL NRS-213
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