node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJF84306.1 | AJF85525.1 | TD68_02200 | TD68_08805 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
AJF84306.1 | dinG | TD68_02200 | TD68_08195 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; 3'-5' exonuclease. | 0.689 |
AJF84306.1 | ligD | TD68_02200 | TD68_03940 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.601 |
AJF84306.1 | mutS | TD68_02200 | TD68_05775 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.471 |
AJF84306.1 | polA | TD68_02200 | TD68_11375 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.964 |
AJF84306.1 | recA | TD68_02200 | TD68_05720 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.626 |
AJF85525.1 | AJF84306.1 | TD68_08805 | TD68_02200 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
AJF85525.1 | dinG | TD68_08805 | TD68_08195 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; 3'-5' exonuclease. | 0.416 |
AJF85525.1 | dnaN | TD68_08805 | TD68_17485 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.462 |
AJF85525.1 | ligD | TD68_08805 | TD68_03940 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
AJF85525.1 | mutM | TD68_08805 | TD68_11370 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.617 |
AJF85525.1 | polA | TD68_08805 | TD68_11375 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.958 |
AJF85525.1 | recA | TD68_08805 | TD68_05720 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.650 |
AJF85525.1 | sbcD | TD68_08805 | TD68_02545 | DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.459 |
AJF86966.1 | dinG | TD68_16590 | TD68_08195 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; 3'-5' exonuclease. | 0.939 |
AJF86966.1 | dnaN | TD68_16590 | TD68_17485 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.443 |
AJF86966.1 | ligD | TD68_16590 | TD68_03940 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
AJF86966.1 | mutS | TD68_16590 | TD68_05775 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.820 |
AJF86966.1 | polA | TD68_16590 | TD68_11375 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.926 |
AJF86966.1 | recA | TD68_16590 | TD68_05720 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.482 |