STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13101.1Adenosylhomocysteinase AhcY. (412 aa)    
Predicted Functional Partners:
AMK13438.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase.
     
 0.967
AMK13432.1
Homoserine dehydrogenase.
   
 
 0.952
AMK13102.1
pfkB family carbohydrate kinase.
 
 
 0.941
AMK13451.1
C-5 cytosine-specific DNA methylase.
     
 0.933
AMK13439.1
Cysteine synthase A CysK.
  
 0.891
AMK14073.1
Cysteine synthase.
  
 0.891
AMK13100.1
Pantothenate synthase PanC.
       0.837
AMK13104.1
Phosphatidylglycerophosphate synthase PgsA.
  
  
 0.796
AMK13103.1
Nucleotide kinase.
       0.782
AMK13219.1
F420 dehydrogenase subunit I FpoI.
  
 
  0.706
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.