STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13192.1RNA-metabolising metallo-beta-lactamase. (412 aa)    
Predicted Functional Partners:
AMK14047.1
ATP-dependent DNA ligase.
   
 0.977
AMK14312.1
DNA-directed RNA polymerase subunit P RpoP.
   
  0.921
AMK14465.1
DNA-directed RNA polymerase subunit H RpoH.
   
  0.921
AMK13628.1
DEAD/DEAH box helicase.
    
 0.920
AMK13649.1
Flap structure-specific endonuclease Fen.
   
 0.910
AMK13194.1
Transcription termination factor Tfs.
  
 0.899
AMK14369.1
DNA polymerase family B.
    
 0.899
AMK13173.1
DNA-directed RNA polymerase subunit K RpoK.
   
  0.898
AMK14464.1
DNA-directed RNA polymerase subunit B RpoB.
   
 0.898
AMK14242.1
DNA-directed RNA polymerase subunit D RpoD.
   
 0.870
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.