STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13207.1GNAT family acetyltransferase. (206 aa)    
Predicted Functional Partners:
AMK13203.1
Ribose-1,5-bisphosphate isomerase e2b2 family.
       0.773
AMK13204.1
Ribulose bisphosphate carboxylase type III RbcL.
       0.773
AMK13205.1
AMP phosphorylase.
       0.773
AMK13206.1
Polysaccharide deacetylase family protein.
       0.773
AMK13202.1
Ribonuclease III Rnc.
       0.620
AMK13208.1
Bifunctional 510-methylene-tetrahydrofolate cyclohydrolase.
       0.603
AMK13209.1
RNA:NAD 2'-phosphotransferase.
       0.603
AMK13210.1
Methanogeneis marker protein 11.
       0.573
AMK13211.1
Undecaprenyl pyrophosphate synthetase UppS.
       0.573
AMK13212.1
B12-binding domain/radical SAM domain-containing protein.
       0.573
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.