STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13296.1DNA-directed RNA polymerase subunit N RpoN. (63 aa)    
Predicted Functional Partners:
AMK13173.1
DNA-directed RNA polymerase subunit K RpoK.
  
 0.999
AMK13194.1
Transcription termination factor Tfs.
   
 0.999
AMK14038.1
DNA-directed RNA polymerase subunit E RpoE1.
   
 0.999
AMK14109.1
DNA-directed RNA polymerase subunit L RpoL.
   
 0.999
AMK14242.1
DNA-directed RNA polymerase subunit D RpoD.
 
 0.999
AMK14312.1
DNA-directed RNA polymerase subunit P RpoP.
   
 0.999
AMK14464.1
DNA-directed RNA polymerase subunit B RpoB.
   
 0.999
AMK14465.1
DNA-directed RNA polymerase subunit H RpoH.
   
 0.999
AMK14462.1
DNA-directed RNA polymerase subunit A'' RpoA2.
   
 0.997
AMK14463.1
DNA-directed RNA polymerase subunit A' RpoA1.
   
 0.995
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.