STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13349.1Hypothetical protein. (107 aa)    
Predicted Functional Partners:
AMK13348.1
Radical SAM enzyme TIGR01210 family.
       0.831
AMK13346.1
Hypothetical protein.
       0.516
AMK13347.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
       0.516
AMK13350.1
Ribosomal protein L3P Rpl3p.
       0.422
AMK13351.1
Ribosomal protein L4P Rpl4p.
       0.422
AMK13352.1
Ribosomal protein L23P Rpl23p.
       0.422
AMK13353.1
Ribosomal protein L2P Rpl2p.
       0.412
AMK13354.1
Ribosomal protein S19P Rps19p.
       0.412
AMK13355.1
Ribosomal protein L22P Rpl22p.
       0.405
AMK13356.1
Ribosomal protein S3P Rps3p.
       0.405
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.