STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13362.1Ribosomal protein L24P Rpl24p. (123 aa)    
Predicted Functional Partners:
AMK13094.1
Ribosomal protein L11P Rpl11p.
  
 0.999
AMK13095.1
Ribosomal protein L1P Rpl1p.
  
 0.999
AMK13096.1
Acidic ribosomal protein P0 RplPO.
 
 0.999
AMK13097.1
Ribosomal protein L12P Rpl12p.
   
 0.999
AMK13113.1
Ribosomal protein LX RplX.
   
 0.999
AMK13174.1
Ribosomal protein S2P Rps2p.
 
 0.999
AMK13242.1
Translation initiation factor eIF-5A.
  
 
 0.999
AMK13293.1
Ribosomal protein L18e Rpl18e.
   
 
 0.999
AMK13294.1
Ribosomal protein L13P Rpl13p.
  
 0.999
AMK13295.1
Ribosomal protein S9P Rps9p.
  
 0.999
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.