STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13389.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
AMK13218.1
F420 dehydrogenase subunit H FpoH.
   
 0.999
AMK13224.1
F420 dehydrogenase subunit M FpoM.
   
 0.999
AMK13403.1
Peptidase M16 family.
   
 0.997
AMK13225.1
F420 dehydrogenase subunit N FpoN.
   
 0.981
AMK13214.1
F420 dehydrogenase subunit A FpoA.
   
 0.980
AMK13216.1
F420 dehydrogenase subunit C FpoC.
   
 0.961
AMK13217.1
F420 dehydrogenase subunit D FpoD.
   
 0.958
AMK13215.1
F420 dehydrogenase subunit B FpoB.
   
 0.918
AMK13219.1
F420 dehydrogenase subunit I FpoI.
   
 0.913
AMK13066.1
A1A0 archaeal ATP synthase subunit K AhaK.
   
 
 0.861
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.