STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13412.1Dihydroorotase PyrC. (421 aa)    
Predicted Functional Partners:
AMK13875.1
Carbamoyl-phosphate synthase small subunit CarA.
 
 0.999
AMK14097.1
Dihydroorotate dehydrogenase electron transfer subunit.
 
 
 0.999
AMK14098.1
Dihydroorotate dehydrogenase.
 
 0.999
AMK14176.1
Aspartate carbamoyltransferase PyrB.
 0.999
AMK13232.1
Orotate phosphoribosyltransferase PyrE.
 
 
 0.997
AMK13874.1
Carbamoyl-phosphate synthase large subunit CarB.
 0.997
AMK14458.1
Orotidine 5'-phosphate decarboxylase PyrF.
  
 
 0.996
AMK14177.1
Aspartate carbamoyltransferase regulatory subunit PyrI.
    
 0.981
AMK13704.1
Pyrrolysine biosynthesis protein PylC.
  
 0.971
AMK13659.1
Ornithine carbamoyltransferase ArgF.
 
 
 0.933
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.