STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13624.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
AMK13320.1
Kae1-associated kinase Bud32.
    
 0.966
AMK14392.1
Universal archaeal protein Kae1.
    
 0.966
AMK14313.1
Hypothetical protein.
     
 0.849
AMK13625.1
Cobaltochelatase CobN.
       0.552
AMK13627.1
Threonine synthase ThrC.
       0.544
AMK13626.1
Homoserine kinase ThrB.
       0.453
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.