STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13696.14Fe-4S binding domain-containing protein. (53 aa)    
Predicted Functional Partners:
AMK13224.1
F420 dehydrogenase subunit M FpoM.
  
 
  0.654
AMK13694.1
SAM-dependent methlyltransferase.
  
    0.626
AMK13695.1
SAM-dependent methlyltransferase.
  
    0.626
AMK13218.1
F420 dehydrogenase subunit H FpoH.
  
 
  0.573
AMK13217.1
F420 dehydrogenase subunit D FpoD.
  
 
  0.545
AMK13216.1
F420 dehydrogenase subunit C FpoC.
  
 
  0.525
AMK13222.1
F420 dehydrogenase subunit K FpoK.
  
 
  0.515
AMK13225.1
F420 dehydrogenase subunit N FpoN.
  
 
  0.514
AMK13215.1
F420 dehydrogenase subunit B FpoB.
  
 
  0.510
AMK13220.1
F420 dehydrogenase subunit J FpoJ.
    
  0.505
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.