STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK13872.1Indolepyruvate ferredoxin oxidoreductase alpha subunit IorA. (604 aa)    
Predicted Functional Partners:
AMK13871.1
Indolepyruvate ferredoxin oxidoreductase beta subunit IorB.
 
 0.989
AMK14005.1
Rubredoxin.
   
 
 0.908
AMK14396.1
Glutamate synthase domain-containing protein.
   
 
 0.908
AMK14053.1
Acetyl coenzyme A synthetase.
   
 0.877
AMK13495.1
Pyruvate:ferredoxin oxidoreductase beta subunit PorB.
  
 
 0.845
AMK13085.1
4Fe-4S binding domain-containing protein.
  
 
 0.781
AMK13498.1
Pyruvate:ferredoxin oxidoreductase gamma subunit PorC.
  
 0.771
AMK13898.1
2-oxoglutarate ferredoxin oxidoreductase beta subunit KorB.
  
 0.771
AMK13899.1
2-oxoglutarate ferredoxin oxidoreductase gamma subunit KorC.
  
 0.771
AMK13189.1
Glutamate dehydrogenase.
    
 0.742
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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