STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK14037.1DNA-directed RNA polymerase subunit E'' RpoE2. (63 aa)    
Predicted Functional Partners:
AMK13093.1
Ribosomal protein L24 family.
  
 
 0.998
AMK14038.1
DNA-directed RNA polymerase subunit E RpoE1.
 
 
 0.997
AMK14034.1
Ribosomal protein S27Ae Rps27ae.
 
    0.980
AMK14035.1
Ribosomal protein S24e Rps24e.
  
    0.869
AMK14036.1
Hypothetical protein.
  
    0.862
AMK14463.1
DNA-directed RNA polymerase subunit A' RpoA1.
  
 
 
 0.740
AMK14462.1
DNA-directed RNA polymerase subunit A'' RpoA2.
  
 
 
 0.706
AMK14039.1
Inorganic H+-translocating pyrophosphatase.
       0.646
AMK14312.1
DNA-directed RNA polymerase subunit P RpoP.
   
  
 0.612
AMK13074.1
DNA polymerase II small subunit.
  
     0.610
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.