STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK14125.1Iron ABC transporter permease protein. (367 aa)    
Predicted Functional Partners:
AMK14126.1
Iron ABC transporter ATP-binding protein.
 0.945
AMK14056.1
Iron ABC transporter substrate-binding protein.
  
 0.826
AMK14130.1
Iron ABC transporter ATP-binding protein.
 
 0.807
AMK14493.1
Iron ABC transporter ATP-binding protein.
 
 0.802
AMK13921.1
Iron ABC transporter ATP-binding protein.
 
 0.801
AMK14194.1
Iron ABC transporter ATP-binding protein.
 
 0.799
AMK14208.1
Iron ABC transporter ATP-binding protein.
 0.799
AMK14537.1
Iron ABC transporter ATP-binding protein.
 
 0.799
AMK14058.1
Iron ABC transporter ATP-binding protein.
 
 0.797
AMK14371.1
Iron ABC transporter ATP-binding protein.
 
 0.797
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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