STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK14172.1Hexapeptide repeat-containing acetyltransferase. (194 aa)    
Predicted Functional Partners:
AMK13945.1
Adenylosuccinate lyase PurB.
  
 
 0.990
AMK14016.1
Non-ribosomal peptide synthetase.
 
 
 0.918
AMK13986.1
Serine O-acetyltransferase CysE.
  
 
0.797
AMK13249.1
Aldehyde dehydrogenase family protein.
  
 
 0.785
AMK13786.1
NADPH-dependent FMN reductase.
      0.769
AMK13622.1
acetyl-CoA acetyltransferase.
  
 
 0.759
AMK14558.1
acetyl-CoA acetyltransferase.
  
 
 0.759
AMK14543.1
Nucleotidyl transferase.
  
 
 0.738
AMK13439.1
Cysteine synthase A CysK.
   
 0.722
AMK14073.1
Cysteine synthase.
   
 0.722
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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