STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK14231.1Digeranylgeranylglycerophospholipid reductase. (389 aa)    
Predicted Functional Partners:
AMK13710.1
Histidinol-phosphate transaminase HisC.
 
 
0.963
AMK14475.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC.
  
  0.961
AMK14135.1
Argininosuccinate synthase ArgG.
  
 0.960
AMK13266.1
Aspartate kinase.
  
 0.959
AMK14418.1
Chorismate mutase/prephenate dehydrogenase.
    
 0.956
AMK13189.1
Glutamate dehydrogenase.
  
 
 0.955
AMK13729.1
Adenylosuccinate synthase PurA.
   
 0.954
AMK14293.1
Pyridoxal-dependent decarboxylase.
  
 
 0.954
AMK13180.1
Aspartate/tyrosine/aromatic aminotransferase.
  
  
 
0.952
AMK14133.1
Glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.
    
 0.952
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.