STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK14327.1Ribosomal protein S27e Rps27e. (55 aa)    
Predicted Functional Partners:
AMK13174.1
Ribosomal protein S2P Rps2p.
  
  0.998
AMK13363.1
Ribosomal protein S4e Rps4e.
  
 0.998
AMK13366.1
Ribosomal protein S8P Rps8p.
   
  0.998
AMK14296.1
Ribosomal protein S8e Rps8e.
  
 0.998
AMK14390.1
Ribosomal protein S15P Rps15p.
   
  0.998
AMK14438.1
Ribosomal protein S17e Rps17e.
  
 
 0.998
AMK13295.1
Ribosomal protein S9P Rps9p.
   
  0.997
AMK13356.1
Ribosomal protein S3P Rps3p.
  
 0.997
AMK13360.1
Ribosomal protein S17P Rps17p.
  
  0.997
AMK13365.1
Ribosomal protein S14P Rps14p.
  
  0.997
Your Current Organism:
methanogenic archaeon mixed
NCBI taxonomy Id: 1452364
Other names: m. archaeon mixed culture ISO4-G1, methanogenic archaeon mixed culture ISO4-G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.