STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56216.1Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. (77 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.784
pip1
Required for phage infection; sp|P49022|PIP_LACLL;evalue=4e-042; PctID=31.14; score=173.
     
 0.526
pip3
Required for phage infection; sp|P49022|PIP_LACLL;evalue=2e-016; PctID=43.01; score=84.7.
     
 0.526
rpiA
Ribose-5-phosphate isomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
    0.424
Your Current Organism:
Methanothermobacter wolfeii
NCBI taxonomy Id: 145261
Other names: ATCC 43096, DSM 2970, JCM 14652, M. wolfeii, Methanobacterium wolfei, Methanobacterium wolfeii, Methanothermobacter wolfei, NBRC 100332, OCM 154
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