Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCM56216.1 | pip1 | MWSIV6_0390 | MWSIV6_0388 | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | Required for phage infection; sp|P49022|PIP_LACLL;evalue=4e-042; PctID=31.14; score=173. | 0.526 |
SCM56216.1 | pip3 | MWSIV6_0390 | MWSIV6_0389 | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | Required for phage infection; sp|P49022|PIP_LACLL;evalue=2e-016; PctID=43.01; score=84.7. | 0.526 |
SCM56216.1 | pyrE | MWSIV6_0390 | MWSIV6_0391 | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.784 |
SCM56216.1 | rpiA | MWSIV6_0390 | MWSIV6_0976 | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | Ribose-5-phosphate isomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.424 |
pip1 | SCM56216.1 | MWSIV6_0388 | MWSIV6_0390 | Required for phage infection; sp|P49022|PIP_LACLL;evalue=4e-042; PctID=31.14; score=173. | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | 0.526 |
pip1 | pip3 | MWSIV6_0388 | MWSIV6_0389 | Required for phage infection; sp|P49022|PIP_LACLL;evalue=4e-042; PctID=31.14; score=173. | Required for phage infection; sp|P49022|PIP_LACLL;evalue=2e-016; PctID=43.01; score=84.7. | 0.993 |
pip3 | SCM56216.1 | MWSIV6_0389 | MWSIV6_0390 | Required for phage infection; sp|P49022|PIP_LACLL;evalue=2e-016; PctID=43.01; score=84.7. | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | 0.526 |
pip3 | pip1 | MWSIV6_0389 | MWSIV6_0388 | Required for phage infection; sp|P49022|PIP_LACLL;evalue=2e-016; PctID=43.01; score=84.7. | Required for phage infection; sp|P49022|PIP_LACLL;evalue=4e-042; PctID=31.14; score=173. | 0.993 |
pyrE | SCM56216.1 | MWSIV6_0391 | MWSIV6_0390 | Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | 0.784 |
rpiA | SCM56216.1 | MWSIV6_0976 | MWSIV6_0390 | Ribose-5-phosphate isomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | Putative protein {ECO:0000313|EMBL:ADL58030,1}; tr|D9PUY3|D9PUY3_METTM,tr|T2GLA1|T2GLA1_9EURY; evalue=2e-024; PctID=93.65; score=117. | 0.424 |