STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56621.1Putative protein {ECO:0000313|EMBL:BAM69414,1}; tr|T2GHG0|T2GHG0_9EURY;evalue=2e-014; PctID=38.19; score=84.7. (144 aa)    
Predicted Functional Partners:
SCM56618.1
Putative protein {ECO:0000313|EMBL:AAB84705,1}; tr|O26301|O26301_METTH;evalue=3e-061; PctID=77.71; score=240.
       0.706
SCM56619.1
May be involved in nickel transport. membrane protein Sequence=AAB89410.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Evidence=; sp|O28435|NIKMN_ARCFU;evalue=5e-009; PctID=29.58; score=61.2.
       0.706
cshA
DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'-and 3'-directions, has RNA-dependent ATPase activity. subfamily; sp|Q4L7W0|CSHA_STAHJ;evalue=6e-090; PctID=40.57; score=331; Belongs to the DEAD box helicase family.
       0.466
Your Current Organism:
Methanothermobacter wolfeii
NCBI taxonomy Id: 145261
Other names: ATCC 43096, DSM 2970, JCM 14652, M. wolfeii, Methanobacterium wolfei, Methanobacterium wolfeii, Methanothermobacter wolfei, NBRC 100332, OCM 154
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.