STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
troBPart of an ATP-driven transport system TroABCD for zinc; sp|P96117|TROB_TREPA;evalue=3e-044; PctID=44.09; score=178. (264 aa)    
Predicted Functional Partners:
znuA
Part of the high-affinity ABC transporter complex ZnuABC involved in zinc import (probable). ZnuABC-mediated zinc transport is required for comF expression and competence development. (ZnuC), two transmembrane proteins (ZnuB) and a solute-binding protein. Lipid-anchor Zur. deficient medium; this effect is suppressed upon addition of exogenous Zn(2+). Growth is slower yet in a double knockout with YciC. Disruption results in low transformability. family; sp|O34966|ZNUA_BACSU;evalue=9e-031; PctID=30.74; score=134.
 
 
 0.999
SCM57262.1
Putative membrane protein slr2045; sp|P73087|Y2045_SYNY3;evalue=4e-050; PctID=40.84; score=198.
 
 0.999
yfiL1
Putative ABC transporter ATP-binding protein YfiL; sp|P94440|YFIL_BACSU;evalue=2e-048; PctID=35.71; score=193.
 
 
0.944
SCM57888.1
Putative binding protein HI_1525; Probably involved in the binding-dependent system. family; sp|P71391|Y1525_HAEIN;evalue=2e-028; PctID=37.91; score=125.
    
 0.848
SCM57264.1
Putative protein {ECO:0000313|EMBL:ADL58582,1}; tr|D9PWI4|D9PWI4_METTM;evalue=2e-029; PctID=95.59; score=133.
       0.781
yadH
Predicted ABC transporter, permease component; Hypothetical protein.
 
 
  0.780
pstS1-1
Phosphate-binding protein PstS 1; Part of the ABC transporter complex PstSACB involved in phosphate import. (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS); sp|Q8DPB1|PSTS1_STRR6,sp|Q97Q31|PSTS1_STRPN; evalue=5e-039; PctID=35.92; score=161.
    
 0.757
pstS1-2
Phosphate-binding protein PstS 1; Part of the ABC transporter complex PstSACB involved in phosphate import. (PstB), two transmembrane proteins (PstC and PstA) and a solute-binding protein (PstS); sp|Q8DPB1|PSTS1_STRR6,sp|Q97Q31|PSTS1_STRPN; evalue=9e-037; PctID=37.70; score=154.
    
 0.757
ycf38
Putative transport permease ycf38; sp|P48278|YCF38_CYAPA;evalue=1e-020; PctID=31.16; score=100.
  
 
  0.750
SCM57908.1
Putative HTH-type transcriptional regulator MJ0568; sp|Q57988|Y568_METJA;evalue=1e-014; PctID=33.94; score=78.6.
  
 
 0.710
Your Current Organism:
Methanothermobacter wolfeii
NCBI taxonomy Id: 145261
Other names: ATCC 43096, DSM 2970, JCM 14652, M. wolfeii, Methanobacterium wolfei, Methanobacterium wolfeii, Methanothermobacter wolfei, NBRC 100332, OCM 154
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