STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQC32371.1glutamyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1180 aa)    
Predicted Functional Partners:
KQC33392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.924
ybeY
rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.836
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
    0.811
KQC32721.1
Secreted protein containing tetratricopeptide repeats; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.792
KQC33267.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.777
KQC34602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.774
KQC33816.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
KQC32374.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.770
KQC34546.1
Asparagine synthetase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
KQC32004.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
Your Current Organism:
Nonlabens sp. YIK11
NCBI taxonomy Id: 1453349
Other names: N. sp. YIK11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.