ALM07212.1 protein (Sediminicola sp. YIK13) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

ALM07212.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)

Predicted Functional Partners:

ALM07211.1

0.990

ALM07213.1

0.962

ALM08528.1

0.640

ALM07210.1

0.492

ALM07209.1

0.475

Your Current Organism:

Sediminicola sp. YIK13

NCBI taxonomy Id: 1453352
Other names: S. sp. YIK13

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALM07209.1	ALM07210.1	SB49_04900	SB49_04905	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
ALM07209.1	ALM07211.1	SB49_04900	SB49_04910	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
ALM07209.1	ALM07212.1	SB49_04900	SB49_04915	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.475
ALM07209.1	ALM07213.1	SB49_04900	SB49_04920	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
ALM07210.1	ALM07209.1	SB49_04905	SB49_04900	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
ALM07210.1	ALM07211.1	SB49_04905	SB49_04910	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALM07210.1	ALM07212.1	SB49_04905	SB49_04915	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
ALM07210.1	ALM07213.1	SB49_04905	SB49_04920	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
ALM07211.1	ALM07209.1	SB49_04910	SB49_04900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.483
ALM07211.1	ALM07210.1	SB49_04910	SB49_04905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALM07211.1	ALM07212.1	SB49_04910	SB49_04915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ALM07211.1	ALM07213.1	SB49_04910	SB49_04920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934
ALM07212.1	ALM07209.1	SB49_04915	SB49_04900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.475
ALM07212.1	ALM07210.1	SB49_04915	SB49_04905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.492
ALM07212.1	ALM07211.1	SB49_04915	SB49_04910	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
ALM07212.1	ALM07213.1	SB49_04915	SB49_04920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
ALM07212.1	ALM08528.1	SB49_04915	SB49_12460	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
ALM07213.1	ALM07209.1	SB49_04920	SB49_04900	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
ALM07213.1	ALM07210.1	SB49_04920	SB49_04905	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
ALM07213.1	ALM07211.1	SB49_04920	SB49_04910	Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934