ALM08065.1 protein (Sediminicola sp. YIK13) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ALM08065.1

FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)

Predicted Functional Partners:

ALM08064.1

0.947

ALM06747.1

0.916

ALM08066.1

0.873

ALM09252.1

0.871

ALM08068.1

0.864

ALM07482.1

0.792

ALM07666.1

0.792

ALM07575.1

0.774

ALM07850.1

0.774

ALM08598.1

0.774

Your Current Organism:

Sediminicola sp. YIK13

NCBI taxonomy Id: 1453352
Other names: S. sp. YIK13

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALM06747.1	ALM08065.1	SB49_02195	SB49_09820	Pesticidal protein Cry28Aa; Derived by automated computational analysis using gene prediction method: Protein Homology.	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
ALM07482.1	ALM07575.1	SB49_06445	SB49_06995	Rieske; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07482.1	ALM07850.1	SB49_06445	SB49_08620	Rieske; Derived by automated computational analysis using gene prediction method: Protein Homology.	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07482.1	ALM08065.1	SB49_06445	SB49_09820	Rieske; Derived by automated computational analysis using gene prediction method: Protein Homology.	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
ALM07482.1	ALM08598.1	SB49_06445	SB49_12890	Rieske; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07575.1	ALM07482.1	SB49_06995	SB49_06445	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rieske; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07575.1	ALM07666.1	SB49_06995	SB49_07490	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07575.1	ALM08065.1	SB49_06995	SB49_09820	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
ALM07666.1	ALM07575.1	SB49_07490	SB49_06995	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07666.1	ALM07850.1	SB49_07490	SB49_08620	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07666.1	ALM08065.1	SB49_07490	SB49_09820	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
ALM07666.1	ALM08598.1	SB49_07490	SB49_12890	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07850.1	ALM07482.1	SB49_08620	SB49_06445	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rieske; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07850.1	ALM07666.1	SB49_08620	SB49_07490	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
ALM07850.1	ALM08065.1	SB49_08620	SB49_09820	Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
ALM08064.1	ALM08065.1	SB49_09815	SB49_09820	NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
ALM08064.1	ALM08066.1	SB49_09815	SB49_09825	NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
ALM08064.1	ALM08068.1	SB49_09815	SB49_09835	NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
ALM08064.1	ALM09252.1	SB49_09815	SB49_09810	NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
ALM08065.1	ALM06747.1	SB49_09820	SB49_02195	FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pesticidal protein Cry28Aa; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916